Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fabG3-oxoacyl-(acyl-carrier protein) reductase; COG_category Q;COG_number COG1028; FabG. (245 aa)    
Predicted Functional Partners:
fabD
Malonyl CoA-acyl carrier protein transacylase; COG_category I;COG_number COG0331; FabD.
 0.999
fabB
3-oxoacyl-(acyl-carrier-protein) synthase I; COG_category I;COG_number COG0304; FabB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 0.990
fabZ
(3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase; COG_category I;COG_number COG0764; FabZ.
 
 
 0.977
fabI
NADH-dependent enoyl-ACP reductase; COG_category I;COG_number COG0623; FabI.
  
 
 0.946
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 
 0.926
nuoCD
NADH dehydrogenase I chain C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
   0.913
pta
Phosphate acetyltransferase; COG_category C;COG_number COG0280; Pta.
     
 0.812
rpmF
50S ribosomal protein L32; COG_category J;COG_number COG0333; RpmF; Belongs to the bacterial ribosomal protein bL32 family.
  
  
 0.711
holB
DNA polymerase III, d' subunit; COG_category L;COG_number COG0470; HolB.
  
   0.690
ycfH
Putative deoxyribonuclease, tatD family; COG_category L;COG_number COG0084; YcfH.
      0.656
Your Current Organism:
Buchnera aphidicola BCc
NCBI taxonomy Id: 372461
Other names: B. aphidicola BCc, Buchnera aphidicola str. Cc (Cinara cedri)
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