STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSANAP00000000029TRASH domain-containing protein. (125 aa)    
Predicted Functional Partners:
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.992
RPL35
Ribosomal protein L35.
   
 0.991
RPL28
Ribosomal protein L28.
   
 0.990
RPL11
Ribosomal protein L11.
   
 0.990
LOC105727437
Uncharacterized protein.
   
 0.987
RPL8
Ribosomal protein L8.
   
 0.980
ENSANAP00000002518
Ribosomal_L2_C domain-containing protein.
   
 0.980
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.980
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.980
ENSANAP00000042039
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.980
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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