Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENSANAP00000000040USP domain-containing protein. (282 aa)    
Predicted Functional Partners:
PRPF8
Pre-mRNA processing factor 8.
   
 0.919
SART1
Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.
    
 0.898
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.894
DDX23
DEAD-box helicase 23.
   
 0.874
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
   
 0.866
PRPF31
Pre-mRNA processing factor 31.
   
 0.858
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.848
RBM42
RNA binding motif protein 42.
   
  0.844
PRPF6
Pre-mRNA processing factor 6.
    
 0.838
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 
 0.827
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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