Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RPL8Ribosomal protein L8. (257 aa)    
Predicted Functional Partners:
RPL13
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.996
RPL11
Ribosomal protein L11.
  
 0.996
RPL35
Ribosomal protein L35.
  
 0.995
RPL28
Ribosomal protein L28.
   
 0.995
LOC105727437
Uncharacterized protein.
  
 0.994
RPS16
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.990
RPL34
Ribosomal protein L34.
  
 0.989
RPS21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
 
 0.988
EEF2
Eukaryotic translation elongation factor 2.
  
 0.987
LOC105719658
Ubiquitin-like domain-containing protein.
   
 0.986
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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