STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H12AZinc finger CCCH-type containing 12A. (598 aa)    
Predicted Functional Partners:
TANK
TRAF family member associated NFKB activator.
   
 
 0.623
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.602
RASGEF1B
RasGEF domain family member 1B.
   
  
 0.573
RC3H1
Ring finger and CCCH-type domains 1.
      
 0.497
TNFAIP3
TNF alpha induced protein 3.
   
 
 0.495
TM2D3
TM2 domain containing 3.
      
 0.491
OPTN
Optineurin.
    
  0.486
CD101
CD101 molecule.
      
 0.476
CASP10
Caspase 10; Belongs to the peptidase C14A family.
     
 0.468
CASP8
Caspase 8; Belongs to the peptidase C14A family.
     
 0.468
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.