Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRATD1LRAT domain containing 1. (292 aa)    
Predicted Functional Partners:
ANKRD55
Ankyrin repeat domain 55.
      
 0.722
PLAAT1
Phospholipase A and acyltransferase 1.
      
 0.710
DOP1A
DOP1 leucine zipper like protein A.
      
 0.613
DOP1B
DOP1 leucine zipper like protein B.
      
 0.613
KIAA0355
KIAA0355.
      
 0.612
AGBL4
ATP/GTP binding protein like 4.
      
 0.605
NT5DC2
5'-nucleotidase domain containing 2.
      
 0.519
AKAP10
A-kinase anchoring protein 10.
      
 0.514
RSAD1
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.477
PLAAT5
Phospholipase A and acyltransferase 5.
      
 0.465
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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