Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR54WD repeat domain 54. (341 aa)    
Predicted Functional Partners:
OSCP1
Organic solute carrier partner 1.
   
   0.893
WDR53
WD repeat domain 53.
      
 0.619
CD99L2
CD99 molecule like 2.
      
 0.602
STAC3
SH3 and cysteine rich domain 3.
    
   0.587
TMEM104
Transmembrane protein 104.
      
 0.559
ITPRIPL1
ITPRIP like 1.
      
 0.552
NAT9
N-acetyltransferase 9 (putative).
      
 0.496
MEMO1
Mediator of cell motility 1.
    
   0.493
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
      
 0.465
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
     
 0.459
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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