Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN19Tetraspanin. (248 aa)    
Predicted Functional Partners:
CD81
Tetraspanin.
      
 0.609
TSPAN16
Tetraspanin 16; Belongs to the tetraspanin (TM4SF) family.
      
 0.595
TSPAN32
Tetraspanin 32; Belongs to the tetraspanin (TM4SF) family.
      
 0.588
RASSF9
Ras association domain family member 9.
      
 0.545
C12orf29
Chromosome 12 open reading frame 29.
      
 0.510
FAM216B
Family with sequence similarity 216 member B.
   
  
 0.482
GASK1B
Golgi associated kinase 1B.
      
 0.480
WDR87
WD repeat domain 87.
  
  
  0.468
TSG101
Tumor susceptibility 101.
      
 0.465
TMTC3
Transmembrane O-mannosyltransferase targeting cadherins 3.
      
 0.463
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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