STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL3LHFPL tetraspan subfamily member 3. (222 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
   
 0.761
CDHR5
Cadherin related family member 5.
    
 0.753
CIB2
Calcium and integrin binding family member 2.
     
 0.637
ENSANAP00000008993
Uncharacterized protein.
      
 0.614
TMIE
Transmembrane inner ear.
     
 0.585
TMC2
Transmembrane channel-like protein.
   
 
 0.566
TMC3
Transmembrane channel-like protein.
   
 
 0.508
TMC1
Transmembrane channel-like protein.
   
 
 0.508
NLGN2
Neuroligin 2.
      
 0.497
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
      
 0.495
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.