STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC3Zinc finger CCHC-type containing 3. (400 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.635
SPATA4
Spermatogenesis associated 4.
      
 0.520
TRIM4
Tripartite motif containing 4.
    
 
 0.470
TENT4B
Terminal nucleotidyltransferase 4B.
   
 
 0.468
TENT4A
Terminal nucleotidyltransferase 4A.
   
 
 0.468
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
  0.452
USP3
Ubiquitinyl hydrolase 1.
    
 
 0.432
DEFB123
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.422
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.