Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBN1Fibrillin 1. (2872 aa)    
Predicted Functional Partners:
FBN2
Fibrillin 2.
  
0.985
FBN3
Fibrillin 3.
  
0.971
LUM
Lumican.
   
 0.959
ENSANAP00000024855
Uncharacterized protein.
   
 0.929
COL3A1
Collagen type III alpha 1 chain.
   
 0.924
COL5A2
Collagen type V alpha 2 chain.
   
 0.919
COL1A2
Collagen type I alpha 2 chain.
   
 0.908
MFAP2
Microfibril associated protein 2.
   
 0.850
COL1A1
Collagen type I alpha 1 chain.
   
 0.843
DCN
Decorin; May affect the rate of fibrils formation.
   
 0.835
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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