STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIMCH1LIM and calponin homology domains 1. (1624 aa)    
Predicted Functional Partners:
MYBPC2
Myosin binding protein C, fast type.
    
 
 0.582
PFKFB1
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1.
   
  
 0.573
AFDN
Afadin, adherens junction formation factor.
    
 0.526
THYN1
Thymocyte nuclear protein 1.
      
 0.516
COPS2
COP9 signalosome subunit 2.
     
 0.510
ZNF445
Zinc finger protein 445.
    
 
 0.505
PKP4
Plakophilin 4.
      
 0.497
MEF2D
Myocyte enhancer factor 2D.
      
 0.495
TRPM7
Transient receptor potential cation channel subfamily M member 7.
      
 0.483
FOXN2
Forkhead box N2.
      
 0.483
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.