Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LIMCH1LIM and calponin homology domains 1. (1624 aa)    
Predicted Functional Partners:
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.671
PKP4
Plakophilin 4.
      
 0.619
THYN1
Thymocyte nuclear protein 1.
      
 0.608
GAS2L2
Growth arrest specific 2 like 2.
  
  
 0.599
MFF
Mitochondrial fission factor.
    
 0.576
APBB3
Amyloid beta precursor protein binding family B member 3.
    
 0.558
SIPA1L2
Signal induced proliferation associated 1 like 2.
     
 0.470
ZNF445
Zinc finger protein 445.
    
 
 0.465
CTNND2
Catenin delta 2.
      
 0.465
TRIM55
Tripartite motif containing 55.
    
 
 0.465
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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