Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
LOC105710419Malate dehydrogenase. (338 aa)    
Predicted Functional Partners:
GOT2
Aspartate aminotransferase.
   
 0.998
CS
Citrate synthase; Belongs to the citrate synthase family.
  
 0.997
FH
Fumarate hydratase.
  
 0.994
GOT1
Aspartate aminotransferase.
   
 0.991
LOC105721292
Aminotran_1_2 domain-containing protein.
   
 0.987
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.984
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
   
 0.983
ACO2
Aconitase 2.
  
 0.982
ENSANAP00000002888
Citrate synthase; Belongs to the citrate synthase family.
  
 0.980
ATP5F1B
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.980
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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