Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSANAP00000001651J domain-containing protein. (261 aa)    
Predicted Functional Partners:
SF3B2
Splicing factor 3b subunit 2.
   
   0.739
SF3A1
Splicing factor 3a subunit 1.
   
   0.714
SF3B1
Splicing factor 3b subunit 1.
   
   0.704
SNRPD3
Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
   
   0.691
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
   
 
 0.672
LOC105705467
Uncharacterized protein.
   
    0.669
SLC4A1AP
Solute carrier family 4 member 1 adaptor protein.
    
   0.660
ENSANAP00000004241
Matrin-type domain-containing protein.
    
   0.660
SF3A2
SF3A2 domain-containing protein.
    
   0.660
ENSANAP00000032675
Matrin-type domain-containing protein.
    
   0.660
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.