STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SF3A3Matrin-type domain-containing protein. (484 aa)    
Predicted Functional Partners:
SF3A1
Splicing factor 3a subunit 1.
   
 0.993
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
   
 0.988
SF3B1
Splicing factor 3b subunit 1.
   
 0.970
SF3B2
Splicing factor 3b subunit 2.
   
 0.963
SF3B4
Splicing factor 3b subunit 4.
    
 0.961
SF3B3
Splicing factor 3b subunit 3.
   
 0.960
DDX46
DEAD-box helicase 46.
   
 0.957
SF3B5
Splicing factor 3B subunit 5; Belongs to the SF3B5 family.
   
 0.954
ENSANAP00000004241
Matrin-type domain-containing protein.
    
 0.953
SF3A2
SF3A2 domain-containing protein.
    
 0.953
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.