ENSANAP00000002889 protein (Aotus nancymaae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSANAP00000002889

Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (746 aa)

Predicted Functional Partners:

VPS26A

0.990

VPS29

0.989

VPS26B

0.987

SNX3

0.958

SNX2

0.952

SNX1

0.950

ENSANAP00000014796

0.938

SNX12

0.925

SNX10

0.868

SNX11

0.868

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSANAP00000002889	ENSANAP00000014796	ENSANAP00000002889	ENSANAP00000014796	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	PX domain-containing protein.	0.938
ENSANAP00000002889	SNX1	ENSANAP00000002889	ENSANAP00000021729	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 1.	0.950
ENSANAP00000002889	SNX10	ENSANAP00000002889	ENSANAP00000007737	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 10.	0.868
ENSANAP00000002889	SNX11	ENSANAP00000002889	ENSANAP00000009188	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 11.	0.868
ENSANAP00000002889	SNX12	ENSANAP00000002889	ENSANAP00000029205	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 12.	0.925
ENSANAP00000002889	SNX2	ENSANAP00000002889	ENSANAP00000010449	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 2.	0.952
ENSANAP00000002889	SNX3	ENSANAP00000002889	ENSANAP00000021861	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Sorting nexin 3.	0.958
ENSANAP00000002889	VPS26A	ENSANAP00000002889	ENSANAP00000008835	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	VPS26, retromer complex component A.	0.990
ENSANAP00000002889	VPS26B	ENSANAP00000002889	ENSANAP00000032956	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	VPS26, retromer complex component B.	0.987
ENSANAP00000002889	VPS29	ENSANAP00000002889	ENSANAP00000034975	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.989
ENSANAP00000014796	ENSANAP00000002889	ENSANAP00000014796	ENSANAP00000002889	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.938
ENSANAP00000014796	SNX12	ENSANAP00000014796	ENSANAP00000029205	PX domain-containing protein.	Sorting nexin 12.	0.877
ENSANAP00000014796	VPS26A	ENSANAP00000014796	ENSANAP00000008835	PX domain-containing protein.	VPS26, retromer complex component A.	0.949
ENSANAP00000014796	VPS26B	ENSANAP00000014796	ENSANAP00000032956	PX domain-containing protein.	VPS26, retromer complex component B.	0.924
ENSANAP00000014796	VPS29	ENSANAP00000014796	ENSANAP00000034975	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.776
SNX1	ENSANAP00000002889	ENSANAP00000021729	ENSANAP00000002889	Sorting nexin 1.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.950
SNX1	SNX2	ENSANAP00000021729	ENSANAP00000010449	Sorting nexin 1.	Sorting nexin 2.	0.994
SNX1	SNX3	ENSANAP00000021729	ENSANAP00000021861	Sorting nexin 1.	Sorting nexin 3.	0.596
SNX1	VPS26A	ENSANAP00000021729	ENSANAP00000008835	Sorting nexin 1.	VPS26, retromer complex component A.	0.950
SNX1	VPS26B	ENSANAP00000021729	ENSANAP00000032956	Sorting nexin 1.	VPS26, retromer complex component B.	0.941