STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NHLH1Nescient helix-loop-helix 1. (133 aa)    
Predicted Functional Partners:
PPP1R17
Protein phosphatase 1 regulatory subunit 17.
   
  
 0.587
TCF3
Transcription factor 3.
    
 0.547
LDB1
LIM domain binding 1.
    
 0.544
LDB2
LIM domain binding 2.
    
 0.540
ENSANAP00000026730
Uncharacterized protein.
    
 0.503
TCF4
Transcription factor 4.
    
 0.503
TCF12
Transcription factor 12.
    
 0.503
ENSANAP00000040928
annotation not available
    
 0.503
LOC105713249
Asparagine synthetase [glutamine-hydrolyzing].
      
 0.495
ASNS
Asparagine synthetase [glutamine-hydrolyzing].
      
 0.495
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.