STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH7Atonal bHLH transcription factor 7. (152 aa)    
Predicted Functional Partners:
VSX2
Visual system homeobox 2.
   
  
 0.580
VSX1
Visual system homeobox 1.
   
  
 0.572
TCF3
Transcription factor 3.
    
 
 0.560
ENSANAP00000026730
Uncharacterized protein.
    
 
 0.560
TCF4
Transcription factor 4.
    
 
 0.560
TCF12
Transcription factor 12.
    
 
 0.560
ENSANAP00000040928
annotation not available
    
 
 0.560
GDF11
Growth differentiation factor 11.
      
 0.497
ONECUT1
One cut domain family member.
      
 0.493
CRX
Cone-rod homeobox.
      
 0.483
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.