STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXD1Homeobox D1. (313 aa)    
Predicted Functional Partners:
HOXB1
Homeobox B1.
  
0.916
HOXA1
Homeobox A1.
   
 
 
0.906
PBX1
PBX homeobox 1.
    
 0.591
PBX3
PBX homeobox 3.
    
 0.591
PBX4
PBX homeobox 4.
    
 0.591
PBX2
PBX homeobox 2.
    
 0.591
LNPK
Lunapark, ER junction formation factor.
      
 0.431
TXNDC16
Thioredoxin domain containing 16.
      
 0.405
NIPAL2
NIPA like domain containing 2.
      
 0.400
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.