STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTF1APancreas associated transcription factor 1a. (331 aa)    
Predicted Functional Partners:
FOXN4
Forkhead box N4.
   
  
 0.677
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.620
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
   
 0.620
VSX1
Visual system homeobox 1.
   
  
 0.618
BARHL2
BarH like homeobox 2.
   
  
 0.614
ISL1
Uncharacterized protein.
   
 0.607
ZIC2
Zic family member 2.
    
 
 0.577
NR2E3
Nuclear receptor subfamily 2 group E member 3.
   
  
 0.572
CACNA1F
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
      
 0.571
SOX9
SRY-box transcription factor 9.
      
 0.571
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.