LOC110567135 protein (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC110567135

Uncharacterized protein. (246 aa)

Predicted Functional Partners:

TAF12

0.949

TAF10

0.947

TAF6

0.945

TAF8

0.941

TAF11

0.941

TAF5

0.940

TAF4

0.939

TRRAP

0.938

TAF2

0.938

TAF1

0.938

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110567135	TAF1	ENSANAP00000004099	ENSANAP00000036982	Uncharacterized protein.	Uncharacterized protein.	0.938
LOC110567135	TAF10	ENSANAP00000004099	ENSANAP00000037999	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.947
LOC110567135	TAF11	ENSANAP00000004099	ENSANAP00000041776	Uncharacterized protein.	TATA-box binding protein associated factor 11.	0.941
LOC110567135	TAF12	ENSANAP00000004099	ENSANAP00000035926	Uncharacterized protein.	TATA-box binding protein associated factor 12.	0.949
LOC110567135	TAF2	ENSANAP00000004099	ENSANAP00000031648	Uncharacterized protein.	TATA-box binding protein associated factor 2.	0.938
LOC110567135	TAF4	ENSANAP00000004099	ENSANAP00000015950	Uncharacterized protein.	TATA-box binding protein associated factor 4.	0.939
LOC110567135	TAF5	ENSANAP00000004099	ENSANAP00000031783	Uncharacterized protein.	TATA-box binding protein associated factor 5.	0.940
LOC110567135	TAF6	ENSANAP00000004099	ENSANAP00000027015	Uncharacterized protein.	TATA-box binding protein associated factor 6.	0.945
LOC110567135	TAF8	ENSANAP00000004099	ENSANAP00000018469	Uncharacterized protein.	TATA-box binding protein associated factor 8.	0.941
LOC110567135	TRRAP	ENSANAP00000004099	ENSANAP00000028166	Uncharacterized protein.	Transformation/transcription domain associated protein; Belongs to the PI3/PI4-kinase family.	0.938
TAF1	LOC110567135	ENSANAP00000036982	ENSANAP00000004099	Uncharacterized protein.	Uncharacterized protein.	0.938
TAF1	TAF10	ENSANAP00000036982	ENSANAP00000037999	Uncharacterized protein.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
TAF1	TAF11	ENSANAP00000036982	ENSANAP00000041776	Uncharacterized protein.	TATA-box binding protein associated factor 11.	0.999
TAF1	TAF12	ENSANAP00000036982	ENSANAP00000035926	Uncharacterized protein.	TATA-box binding protein associated factor 12.	0.999
TAF1	TAF2	ENSANAP00000036982	ENSANAP00000031648	Uncharacterized protein.	TATA-box binding protein associated factor 2.	0.999
TAF1	TAF4	ENSANAP00000036982	ENSANAP00000015950	Uncharacterized protein.	TATA-box binding protein associated factor 4.	0.984
TAF1	TAF5	ENSANAP00000036982	ENSANAP00000031783	Uncharacterized protein.	TATA-box binding protein associated factor 5.	0.980
TAF1	TAF6	ENSANAP00000036982	ENSANAP00000027015	Uncharacterized protein.	TATA-box binding protein associated factor 6.	0.999
TAF1	TAF8	ENSANAP00000036982	ENSANAP00000018469	Uncharacterized protein.	TATA-box binding protein associated factor 8.	0.991
TAF10	LOC110567135	ENSANAP00000037999	ENSANAP00000004099	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Uncharacterized protein.	0.947