STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRM4Serine/arginine repetitive matrix 4. (549 aa)    
Predicted Functional Partners:
CLCA2
Chloride channel accessory 2.
    
 0.654
SLC52A3
Solute carrier family 52 member 3.
      
 0.633
RPGRIP1L
RPGRIP1 like.
      
 0.630
STOX1
Storkhead box 1.
      
 0.628
COL10A1
Collagen type X alpha 1 chain.
    
 0.626
ADGRV1
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.625
TMC1
Transmembrane channel-like protein.
    
 0.620
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.619
ILDR2
Immunoglobulin like domain containing receptor 2.
      
 0.614
MYO6
Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.611
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.