STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF113BRing finger protein 113B. (322 aa)    
Predicted Functional Partners:
CWC27
CWC27 spliceosome associated cyclophilin.
    
 0.952
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.950
DHX16
DEAH-box helicase 16.
    
 0.944
CDC40
Cell division cycle 40.
    
 0.930
CDC5L
Cell division cycle 5 like.
    
 
 0.897
SF3B2
Splicing factor 3b subunit 2.
    
 
 0.893
BUD13
BUD13 homolog.
    
 
 0.890
CWC15
CWC15 spliceosome associated protein homolog.
   
 
 0.886
SF3B1
Splicing factor 3b subunit 1.
    
 
 0.881
SF3A1
Splicing factor 3a subunit 1.
    
 
 0.877
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.