STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM5CLysine demethylase 5C. (1568 aa)    
Predicted Functional Partners:
ATP5F1A
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.980
ATP5F1D
ATP synthase F1 subunit delta.
  
 0.980
LOC105705641
Uncharacterized protein.
  
 0.952
ATP5PO
Uncharacterized protein.
  
 0.952
ATP5PB
ATP synthase peripheral stalk-membrane subunit b.
   
 0.915
ATP5F1C
ATP synthase subunit gamma.
  
 0.900
LOC105730548
Uncharacterized protein.
  
 0.900
LOC105732625
Uncharacterized protein.
  
 0.900
ENSANAP00000040958
Uncharacterized protein.
  
 0.900
ATP5F1E
ATP synthase F1 subunit epsilon.
    
 0.876
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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