STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105726689IF rod domain-containing protein; Belongs to the intermediate filament family. (474 aa)    
Predicted Functional Partners:
LOC105731662
Ubiquitin conjugating enzyme E2 V1.
   
 0.818
KRT18
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
0.695
ENSANAP00000000724
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.678
LOC110569344
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.678
ENSANAP00000023548
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.678
ENSANAP00000025564
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.678
ENSANAP00000026881
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.678
LOC105710335
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
0.678
BAG3
BCL2 associated athanogene 3.
    
 
 0.572
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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