STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105720202Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex. (142 aa)    
Predicted Functional Partners:
APOC3
Apolipoprotein C3.
   
 
 0.670
APOB
Apolipoprotein B.
   
 
 0.646
APOF
Apolipoprotein F.
   
  
 0.600
APOM
Apolipoprotein M.
     
 0.590
PLTP
Phospholipid transfer protein.
     
 0.508
APOA2
Apolipoprotein A2.
     
 0.500
LOC105720203
Serum amyloid A protein; Major acute phase reactant. Apolipoprotein of the HDL complex.
  
 
0.463
CETP
Cholesteryl ester transfer protein.
     
 0.451
VLDLR
Very low density lipoprotein receptor.
     
 0.446
APOA4
Apolipoprotein A4.
     
 0.429
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.