Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XYLT1Xylosyltransferase 1. (865 aa)    
Predicted Functional Partners:
XYLT2
Xylosyltransferase 2.
  
 
0.992
B4GALT7
Beta-1,4-galactosyltransferase 7.
     
 0.954
SDC1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.888
NELFA
Negative elongation factor complex member A.
    
 
 0.786
NELFB
Negative elongation factor complex member B.
    
   0.775
NELFCD
Negative elongation factor complex member C/D.
    
   0.775
NELFE
Negative elongation factor complex member E.
    
   0.772
RIN3
Ras and Rab interactor 3.
    
   0.732
POMK
Protein O-mannose kinase.
    
   0.661
B4GALT3
Beta-1,4-galactosyltransferase 3.
    
 
 0.644
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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