ADRA1D protein (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ADRA1D

Adrenoceptor alpha 1D. (571 aa)

Predicted Functional Partners:

GNA13

0.931

GNA12

0.931

ADRA1A

0.913

ADRA1B

0.911

GNAQ

0.871

GNA11

0.871

GNA14

0.792

GNA15

0.787

SNTB2

0.746

GNB5

0.718

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADRA1A	ADRA1B	ENSANAP00000009446	ENSANAP00000023084	Adrenoceptor alpha 1A.	Adrenoceptor alpha 1B.	0.918
ADRA1A	ADRA1D	ENSANAP00000009446	ENSANAP00000006099	Adrenoceptor alpha 1A.	Adrenoceptor alpha 1D.	0.913
ADRA1A	GNA11	ENSANAP00000009446	ENSANAP00000030586	Adrenoceptor alpha 1A.	G protein subunit alpha 11.	0.874
ADRA1A	GNA12	ENSANAP00000009446	ENSANAP00000021561	Adrenoceptor alpha 1A.	G protein subunit alpha 12.	0.938
ADRA1A	GNA13	ENSANAP00000009446	ENSANAP00000013993	Adrenoceptor alpha 1A.	G protein subunit alpha 13.	0.938
ADRA1A	GNA14	ENSANAP00000009446	ENSANAP00000003344	Adrenoceptor alpha 1A.	G protein subunit alpha 14.	0.797
ADRA1A	GNA15	ENSANAP00000009446	ENSANAP00000023403	Adrenoceptor alpha 1A.	G protein subunit alpha 15.	0.787
ADRA1A	GNAQ	ENSANAP00000009446	ENSANAP00000004849	Adrenoceptor alpha 1A.	G protein subunit alpha q.	0.874
ADRA1A	GNB5	ENSANAP00000009446	ENSANAP00000016264	Adrenoceptor alpha 1A.	G protein subunit beta 5.	0.757
ADRA1B	ADRA1A	ENSANAP00000023084	ENSANAP00000009446	Adrenoceptor alpha 1B.	Adrenoceptor alpha 1A.	0.918
ADRA1B	ADRA1D	ENSANAP00000023084	ENSANAP00000006099	Adrenoceptor alpha 1B.	Adrenoceptor alpha 1D.	0.911
ADRA1B	GNA11	ENSANAP00000023084	ENSANAP00000030586	Adrenoceptor alpha 1B.	G protein subunit alpha 11.	0.868
ADRA1B	GNA12	ENSANAP00000023084	ENSANAP00000021561	Adrenoceptor alpha 1B.	G protein subunit alpha 12.	0.922
ADRA1B	GNA13	ENSANAP00000023084	ENSANAP00000013993	Adrenoceptor alpha 1B.	G protein subunit alpha 13.	0.922
ADRA1B	GNA14	ENSANAP00000023084	ENSANAP00000003344	Adrenoceptor alpha 1B.	G protein subunit alpha 14.	0.787
ADRA1B	GNA15	ENSANAP00000023084	ENSANAP00000023403	Adrenoceptor alpha 1B.	G protein subunit alpha 15.	0.787
ADRA1B	GNAQ	ENSANAP00000023084	ENSANAP00000004849	Adrenoceptor alpha 1B.	G protein subunit alpha q.	0.868
ADRA1B	GNB5	ENSANAP00000023084	ENSANAP00000016264	Adrenoceptor alpha 1B.	G protein subunit beta 5.	0.718
ADRA1D	ADRA1A	ENSANAP00000006099	ENSANAP00000009446	Adrenoceptor alpha 1D.	Adrenoceptor alpha 1A.	0.913
ADRA1D	ADRA1B	ENSANAP00000006099	ENSANAP00000023084	Adrenoceptor alpha 1D.	Adrenoceptor alpha 1B.	0.911