STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF38Ring finger protein 38. (517 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.891
LOC105719658
Ubiquitin-like domain-containing protein.
    
 0.869
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.869
ENSANAP00000036022
Uncharacterized protein.
    
 0.867
LOC105732229
Ubiquitin-like domain-containing protein.
    
 0.843
LOC105713378
Ubiquitin-like domain-containing protein.
    
 0.843
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.830
LOC105706260
Ubiquitin-like domain-containing protein.
    
 0.795
ENSANAP00000035706
Ubiquitin-like domain-containing protein.
    
 0.793
UAP1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.697
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.