STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCSecreted protein acidic and cysteine rich. (303 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
  
 0.926
COL1A2
Collagen type I alpha 2 chain.
   
 
 0.916
COL1A1
Collagen type I alpha 1 chain.
   
 
 0.912
DCN
Decorin; May affect the rate of fibrils formation.
   
  
 0.854
DCN-2
Decorin; May affect the rate of fibrils formation.
   
  
 0.854
COL3A1
Collagen type III alpha 1 chain.
   
 
 0.809
STAB1
Stabilin 1.
     
 0.705
ENSANAP00000017574
VWFA domain-containing protein.
   
 
 0.701
STAB2
Stabilin 2.
     
 0.668
FMOD
Fibromodulin.
   
  
 0.667
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.