STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VTA1Vesicle trafficking 1. (307 aa)    
Predicted Functional Partners:
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.993
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.993
ENSANAP00000024075
Uncharacterized protein.
    
 0.983
ENSANAP00000028348
Uncharacterized protein.
    
 0.983
CHMP1A
Charged multivesicular body protein 1A.
    
 0.983
CHMP5
Uncharacterized protein.
   
 0.980
IST1
IST1 factor associated with ESCRT-III.
   
 
 0.961
ENSANAP00000025583
Uncharacterized protein.
   
 0.959
ENSANAP00000028641
Uncharacterized protein.
   
 0.959
CHMP2A
Charged multivesicular body protein 2A.
    
 0.930
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.