STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RASGEF1BRasGEF domain family member 1B. (560 aa)    
Predicted Functional Partners:
ZC3H4
Zinc finger CCCH-type containing 4.
      
 0.579
ZC3H12A
Zinc finger CCCH-type containing 12A.
   
  
 0.573
UNC5D
Unc-5 netrin receptor D.
      
 0.509
PRKG2
cGMP-dependent protein kinase.
      
 0.508
DLL1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
      
 0.495
HES6
Hes family bHLH transcription factor 6.
      
 0.493
SLC26A3
Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family.
      
 0.448
CUX2
Homeobox protein cut-like.
   
  
 0.448
ENSANAP00000005610
PhoLip_ATPase_N domain-containing protein.
      
 0.440
ATP9B
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
      
 0.440
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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