STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO7LIM domain 7. (1646 aa)    
Predicted Functional Partners:
ACTN4
Actinin alpha 4.
    
 0.888
AFDN
Afadin, adherens junction formation factor.
    
 0.869
ACTN1
Actinin alpha 1.
    
 0.776
COMMD6
COMM domain containing 6.
     
 0.754
CUL1
Cullin 1; Belongs to the cullin family.
     
 0.595
EMD
Emerin.
    
 
 0.589
ECT2L
Epithelial cell transforming 2 like.
    
 
 0.573
FBXO48
F-box protein 48.
      
 0.572
COMMD8
COMM domain containing 8.
    
  0.568
PCDH8
Protocadherin 8.
   
 
 0.503
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.