Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTP4A1Protein tyrosine phosphatase 4A1. (173 aa)    
Predicted Functional Partners:
PTP4A2
Protein tyrosine phosphatase 4A2.
   
   0.994
RABGGTB
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
  0.945
AUP1
AUP1 lipid droplet regulating VLDL assembly factor.
    
   0.890
CNNM3
Cyclin and CBS domain divalent metal cation transport mediator 3.
    
 
 0.885
CNNM1
Cyclin and CBS domain divalent metal cation transport mediator 1.
    
 
 0.852
CNNM2
Cyclin and CBS domain divalent metal cation transport mediator 2.
    
 
 0.806
CNNM4
Cyclin and CBS domain divalent metal cation transport mediator 4.
    
 
 0.803
CUNHXorf40A
ASCH domain-containing protein.
    
   0.766
FLRT2
Fibronectin leucine rich transmembrane protein 2.
      
 0.644
USP30
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.610
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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