TNFRSF21 protein (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TNFRSF21

Uncharacterized protein. (655 aa)

Predicted Functional Partners:

APP

0.900

APLP2

0.730

APLP1

0.563

PARM1

0.495

TRADD

0.494

PODXL2

0.462

SLC7A8

0.440

ATP1B2

0.435

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APLP1	TNFRSF21	ENSANAP00000014527	ENSANAP00000008089	Amyloid beta precursor like protein 1.	Uncharacterized protein.	0.563
APLP2	APP	ENSANAP00000010258	ENSANAP00000006013	Amyloid beta precursor like protein 2.	Amyloid beta precursor protein.	0.634
APLP2	TNFRSF21	ENSANAP00000010258	ENSANAP00000008089	Amyloid beta precursor like protein 2.	Uncharacterized protein.	0.730
APP	APLP2	ENSANAP00000006013	ENSANAP00000010258	Amyloid beta precursor protein.	Amyloid beta precursor like protein 2.	0.634
APP	TNFRSF21	ENSANAP00000006013	ENSANAP00000008089	Amyloid beta precursor protein.	Uncharacterized protein.	0.900
ATP1B2	PARM1	ENSANAP00000006689	ENSANAP00000000019	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	Prostate androgen-regulated mucin-like protein 1.	0.538
ATP1B2	SLC7A8	ENSANAP00000006689	ENSANAP00000011611	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	Solute carrier family 7 member 8.	0.510
ATP1B2	TNFRSF21	ENSANAP00000006689	ENSANAP00000008089	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	Uncharacterized protein.	0.435
PARM1	ATP1B2	ENSANAP00000000019	ENSANAP00000006689	Prostate androgen-regulated mucin-like protein 1.	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	0.538
PARM1	SLC7A8	ENSANAP00000000019	ENSANAP00000011611	Prostate androgen-regulated mucin-like protein 1.	Solute carrier family 7 member 8.	0.551
PARM1	TNFRSF21	ENSANAP00000000019	ENSANAP00000008089	Prostate androgen-regulated mucin-like protein 1.	Uncharacterized protein.	0.495
PODXL2	TNFRSF21	ENSANAP00000016691	ENSANAP00000008089	Podocalyxin like 2.	Uncharacterized protein.	0.462
SLC7A8	ATP1B2	ENSANAP00000011611	ENSANAP00000006689	Solute carrier family 7 member 8.	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	0.510
SLC7A8	PARM1	ENSANAP00000011611	ENSANAP00000000019	Solute carrier family 7 member 8.	Prostate androgen-regulated mucin-like protein 1.	0.551
SLC7A8	TNFRSF21	ENSANAP00000011611	ENSANAP00000008089	Solute carrier family 7 member 8.	Uncharacterized protein.	0.440
TNFRSF21	APLP1	ENSANAP00000008089	ENSANAP00000014527	Uncharacterized protein.	Amyloid beta precursor like protein 1.	0.563
TNFRSF21	APLP2	ENSANAP00000008089	ENSANAP00000010258	Uncharacterized protein.	Amyloid beta precursor like protein 2.	0.730
TNFRSF21	APP	ENSANAP00000008089	ENSANAP00000006013	Uncharacterized protein.	Amyloid beta precursor protein.	0.900
TNFRSF21	ATP1B2	ENSANAP00000008089	ENSANAP00000006689	Uncharacterized protein.	Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane. Belongs to the X(+)/potassium ATPases subunit beta family.	0.435
TNFRSF21	PARM1	ENSANAP00000008089	ENSANAP00000000019	Uncharacterized protein.	Prostate androgen-regulated mucin-like protein 1.	0.495