STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM4Uncharacterized protein. (118 aa)    
Predicted Functional Partners:
TPI1
Triosephosphate isomerase.
  
 0.875
LOC105720327
Triosephosphate isomerase.
  
 0.875
PGK2
Phosphoglycerate kinase.
   
 0.784
LOC110568802
Phosphoglycerate kinase.
   
 0.784
PGK1
Phosphoglycerate kinase.
   
 0.784
ENSANAP00000015958
Phosphoglycerate kinase.
   
 0.784
ENSANAP00000031290
Phosphoglycerate kinase.
   
 0.784
ENSANAP00000034098
Phosphoglycerate kinase.
   
 0.784
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
   
 0.725
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.697
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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