STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMUB1Transmembrane and ubiquitin like domain containing 1. (248 aa)    
Predicted Functional Partners:
ERLIN2
ER lipid raft associated 2.
    
 
 0.755
ERLIN1
ER lipid raft associated 1.
    
 
 0.588
RNF170
Ring finger protein 170.
    
 
 0.587
TMUB2
Transmembrane and ubiquitin like domain containing 2.
  
 
 
0.577
C6orf120
Chromosome 6 open reading frame 120.
      
 0.524
FAM8A1
Family with sequence similarity 8 member A1.
      
 0.497
TMEM259
Transmembrane protein 259.
    
 
 0.496
RNF185
Ring finger protein 185.
    
 
 0.450
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
      
 0.441
MYL1
Myosin light chain 1.
   
  
 0.435
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.