STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD7BThrombospondin type 1 domain containing 7B. (1608 aa)    
Predicted Functional Partners:
GDPD2
Glycerophosphodiester phosphodiesterase domain containing 2.
      
 0.572
KCNMB4
Uncharacterized protein.
      
 0.571
PDZRN4
PDZ domain containing ring finger 4.
      
 0.566
PGLYRP3
Peptidoglycan recognition protein 3.
      
 0.565
CNTN6
Contactin 6.
      
 0.564
COL23A1
Collagen type XXIII alpha 1 chain.
    
 0.546
SYT17
Synaptotagmin 17.
    
 
 0.542
RAB3B
RAB3B, member RAS oncogene family.
      
 0.538
PGLYRP4
Peptidoglycan recognition protein 4.
      
 0.538
PAMR1
Peptidase domain containing associated with muscle regeneration 1; Belongs to the peptidase S1 family.
      
 0.538
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.