STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105718467USP domain-containing protein; Belongs to the peptidase C19 family. (841 aa)    
Predicted Functional Partners:
RNF123
Ring finger protein 123.
   
 0.708
TCEAL1
Transcription elongation factor A like 1.
   
 
 0.626
NFKBIA
NFKB inhibitor alpha.
     
 0.577
MRPL11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.576
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.569
USP7
Uncharacterized protein; Belongs to the peptidase C19 family.
    
 
 0.567
ENSANAP00000014529
USP7_C2 domain-containing protein.
    
 
 0.567
ENSANAP00000015998
Uncharacterized protein.
    
 
 0.567
MRPS14
Mitochondrial ribosomal protein S14.
    
 
 0.564
MRPL4
Mitochondrial ribosomal protein L4.
    
 
 0.560
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.