STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD2FERM and PDZ domain containing 2. (1396 aa)    
Predicted Functional Partners:
PTPN20
Protein tyrosine phosphatase non-receptor type 20.
 
   
 0.855
TRAF3IP1
TRAF3 interacting protein 1.
    
 0.658
IFT80
Intraflagellar transport 80.
    
 0.619
REM1
RRAD and GEM like GTPase 1.
    
 0.592
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.589
IFT88
Intraflagellar transport 88.
    
 0.588
SNTA1
Syntrophin alpha 1.
      
 0.565
CLUAP1
Clusterin associated protein 1.
    
 0.544
IFT52
Intraflagellar transport 52.
    
 0.533
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
0.531
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.