STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIGD1BHIG1 hypoxia inducible domain family member 1B. (99 aa)    
Predicted Functional Partners:
LOC105728548
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 
 0.691
COX6A2
Cytochrome c oxidase subunit 6A, mitochondrial.
   
 
 0.691
GATC
Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
   
 
 0.691
C1orf198
Chromosome 1 open reading frame 198.
   
 
 0.657
COX5B
Cytochrome c oxidase subunit 5B.
   
 
 0.657
ENSANAP00000036539
Uncharacterized protein.
   
 
 0.657
PMPCB
Peptidase, mitochondrial processing beta subunit; Belongs to the peptidase M16 family.
    
 
 0.559
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
    
 
 0.559
R3HDM4
R3H domain containing 4.
    
 
 0.465
GTSE1
G2 and S-phase expressed 1.
    
 
 0.465
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.