STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20orf85Chromosome 20 open reading frame 85. (136 aa)    
Predicted Functional Partners:
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
   
    0.779
SNTN
Sentan, cilia apical structure protein.
   
    0.747
C11orf88
Chromosome 11 open reading frame 88.
   
  
 0.483
CAPSL
Calcyphosine like.
   
    0.479
NPEPL1
Aminopeptidase like 1.
      
 0.469
TMEM190
Transmembrane protein 190.
   
    0.455
NCOA5
Nuclear receptor coactivator 5.
      
 0.451
DDX27
DEAD-box helicase 27; Belongs to the DEAD box helicase family.
      
 0.439
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.