STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSNARE1t-SNARE domain containing 1; Belongs to the syntaxin family. (509 aa)    
Predicted Functional Partners:
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
   
 0.969
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
   
 0.944
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
 0.944
STX8
Syntaxin 8.
    
 0.915
VAMP7
Longin domain-containing protein; Belongs to the synaptobrevin family.
   
 0.886
VPS16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 
 0.873
NAPB
NSF attachment protein beta.
    
 0.869
NAPA
NSF attachment protein alpha.
    
 0.869
VPS41
Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.
    
 
 0.861
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 
 0.858
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.