STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHBDF1Rhomboid 5 homolog 1. (891 aa)    
Predicted Functional Partners:
ADAM17
ADAM metallopeptidase domain 17.
    
 0.720
FRMD8
FERM domain containing 8.
     
 0.589
ADAM7
ADAM metallopeptidase domain 7.
      
 0.567
AREG
Amphiregulin.
      
 0.538
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
  
    0.515
ST20-MTHFS
5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
  
    0.515
HBEGF
Heparin binding EGF like growth factor.
      
 0.489
METTL23
Methyltransferase like 23.
    
 
 0.429
PRPSAP2
Phosphoribosyl pyrophosphate synthetase associated protein 2.
      
 0.424
ADAM10
ADAM metallopeptidase domain 10.
    
 0.421
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.