EFHD1 protein (Aotus nancymaae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

EFHD1

EF-hand domain family member D1. (233 aa)

Predicted Functional Partners:

CAPZB

0.643

ERMN

0.566

DUS2

0.538

ATPAF2

0.538

COQ10B

0.538

TMTC1

0.537

SFXN2

0.493

ATP5MD

0.493

PCCB

0.491

DRG2

0.439

Your Current Organism:

Aotus nancymaae

NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5MD	ATPAF2	ENSANAP00000032545	ENSANAP00000011261	ATP synthase membrane subunit DAPIT.	ATP synthase mitochondrial F1 complex assembly factor 2.	0.493
ATP5MD	COQ10B	ENSANAP00000032545	ENSANAP00000024089	ATP synthase membrane subunit DAPIT.	Coenzyme Q10B.	0.493
ATP5MD	DUS2	ENSANAP00000032545	ENSANAP00000010326	ATP synthase membrane subunit DAPIT.	Dihydrouridine synthase 2.	0.493
ATP5MD	EFHD1	ENSANAP00000032545	ENSANAP00000009871	ATP synthase membrane subunit DAPIT.	EF-hand domain family member D1.	0.493
ATP5MD	PCCB	ENSANAP00000032545	ENSANAP00000016361	ATP synthase membrane subunit DAPIT.	Propionyl-CoA carboxylase subunit beta.	0.414
ATP5MD	SFXN2	ENSANAP00000032545	ENSANAP00000028130	ATP synthase membrane subunit DAPIT.	Sidoreflexin.	0.476
ATP5MD	TMTC1	ENSANAP00000032545	ENSANAP00000022690	ATP synthase membrane subunit DAPIT.	Transmembrane O-mannosyltransferase targeting cadherins 1.	0.483
ATPAF2	ATP5MD	ENSANAP00000011261	ENSANAP00000032545	ATP synthase mitochondrial F1 complex assembly factor 2.	ATP synthase membrane subunit DAPIT.	0.493
ATPAF2	COQ10B	ENSANAP00000011261	ENSANAP00000024089	ATP synthase mitochondrial F1 complex assembly factor 2.	Coenzyme Q10B.	0.538
ATPAF2	DRG2	ENSANAP00000011261	ENSANAP00000005395	ATP synthase mitochondrial F1 complex assembly factor 2.	Developmentally regulated GTP binding protein 2.	0.524
ATPAF2	DUS2	ENSANAP00000011261	ENSANAP00000010326	ATP synthase mitochondrial F1 complex assembly factor 2.	Dihydrouridine synthase 2.	0.547
ATPAF2	EFHD1	ENSANAP00000011261	ENSANAP00000009871	ATP synthase mitochondrial F1 complex assembly factor 2.	EF-hand domain family member D1.	0.538
ATPAF2	PCCB	ENSANAP00000011261	ENSANAP00000016361	ATP synthase mitochondrial F1 complex assembly factor 2.	Propionyl-CoA carboxylase subunit beta.	0.542
ATPAF2	SFXN2	ENSANAP00000011261	ENSANAP00000028130	ATP synthase mitochondrial F1 complex assembly factor 2.	Sidoreflexin.	0.493
ATPAF2	TMTC1	ENSANAP00000011261	ENSANAP00000022690	ATP synthase mitochondrial F1 complex assembly factor 2.	Transmembrane O-mannosyltransferase targeting cadherins 1.	0.537
CAPZB	EFHD1	ENSANAP00000004417	ENSANAP00000009871	F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.	EF-hand domain family member D1.	0.643
COQ10B	ATP5MD	ENSANAP00000024089	ENSANAP00000032545	Coenzyme Q10B.	ATP synthase membrane subunit DAPIT.	0.493
COQ10B	ATPAF2	ENSANAP00000024089	ENSANAP00000011261	Coenzyme Q10B.	ATP synthase mitochondrial F1 complex assembly factor 2.	0.538
COQ10B	DRG2	ENSANAP00000024089	ENSANAP00000005395	Coenzyme Q10B.	Developmentally regulated GTP binding protein 2.	0.439
COQ10B	DUS2	ENSANAP00000024089	ENSANAP00000010326	Coenzyme Q10B.	Dihydrouridine synthase 2.	0.549