Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPM1NProtein phosphatase, Mg2+/Mn2+ dependent 1N (putative). (429 aa)    
Predicted Functional Partners:
LOC105730229
PPM-type phosphatase domain-containing protein.
   
   0.913
PPM1A
Protein phosphatase, Mg2+/Mn2+ dependent 1A.
   
   0.913
ISG15
ISG15 ubiquitin like modifier.
   
 0.903
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.793
GHRH
Growth hormone releasing hormone.
   
    0.771
MTFMT
Mitochondrial methionyl-tRNA formyltransferase.
  
    0.575
LOC105730336
DAGKc domain-containing protein.
    
   0.561
TBK1
TANK binding kinase 1.
   
 0.554
AMELX
Uncharacterized protein.
   
    0.534
SMAD4
Mothers against decapentaplegic homolog.
    
 0.524
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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