Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP4BCharged multivesicular body protein 4B. (224 aa)    
Predicted Functional Partners:
CHMP6
Charged multivesicular body protein 6.
   
 0.995
CHMP2A
Charged multivesicular body protein 2A.
   
 0.994
PDCD6IP
Programmed cell death 6 interacting protein.
    
 0.994
CHMP7
Charged multivesicular body protein 7.
    
0.989
CHMP4C
Charged multivesicular body protein 4C.
  
 
0.989
CHMP1A
Charged multivesicular body protein 1A.
   
 0.982
CHMP2B
Charged multivesicular body protein 2B.
   
 0.980
VPS25
Vacuolar protein sorting 25 homolog.
    
 0.965
LOC105712346
Uncharacterized protein.
  
 
 
0.962
VPS36
Vacuolar protein sorting 36 homolog.
    
 0.957
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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