Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC105707612Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
RBM28
RNA binding motif protein 28.
   
   0.743
WDR18
WD repeat domain 18.
   
  0.729
DDX24
DEAD-box helicase 24.
   
 0.722
DNTTIP2
Deoxynucleotidyltransferase terminal interacting protein 2.
   
    0.692
DDX52
DExD-box helicase 52.
   
  
 0.689
CEBPZ
CCAAT enhancer binding protein zeta.
   
 
 0.685
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.675
NOP58
NOP58 ribonucleoprotein.
   
 
 0.670
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]
    
 0.665
AAMP
Angio associated migratory cell protein.
   
   0.662
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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