STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGGF1Uncharacterized protein. (716 aa)    
Predicted Functional Partners:
DDX10
RNA helicase.
    
 0.726
UTP6
UTP6 small subunit processome component.
   
 
 0.713
NOL6
Nucleolar protein 6.
    
 
 0.712
KRR1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.710
UTP3
UTP3 small subunit processome component.
   
   0.710
RRP36
Ribosomal RNA processing 36.
   
   0.702
BYSL
Bystin like.
    
 
 0.702
NOM1
MI domain-containing protein.
    
   0.701
UTP25
UTP25 small subunit processor component.
    
   0.701
NOP14
NOP14 nucleolar protein.
    
   0.701
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.