Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGGF1Uncharacterized protein. (716 aa)    
Predicted Functional Partners:
MAB21L3
Mab-21 like 3.
    
   0.852
CHERP
Calcium homeostasis endoplasmic reticulum protein.
   
 
 0.811
TOE1
C3H1-type domain-containing protein.
    
   0.762
SNRPC
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. SNRPC/U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. Belongs to the U1 [...]
    
   0.753
ENSANAP00000026060
Dynein light chain.
    
   0.696
DYNLL2
Dynein light chain.
    
   0.696
ENSANAP00000029051
C3H1-type domain-containing protein.
    
   0.689
RAE1
Ribonucleic acid export 1.
    
   0.661
ENSANAP00000004241
Matrin-type domain-containing protein.
    
   0.606
SF3A2
SF3A2 domain-containing protein.
    
   0.606
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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