Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO2LIM domain only 2. (223 aa)    
Predicted Functional Partners:
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.989
LDB1
LIM domain binding 1.
    
 0.984
LDB2
LIM domain binding 2.
    
 0.966
GATA1
GATA binding protein 1.
    
 0.964
POLR2G
RNA polymerase II subunit G.
    
   0.844
TAL2
TAL bHLH transcription factor 2.
    
 0.836
GATA2
GATA binding protein 2.
    
 0.818
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.816
POLR2D
RNA polymerase II subunit D.
    
   0.806
POLR2C
RNA polymerase II subunit C.
    
   0.803
Your Current Organism:
Aotus nancymaae
NCBI taxonomy Id: 37293
Other names: A. nancymaae, Aotus nancymai
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