Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GATA1 | GATA2 | ENSANAP00000028609 | ENSANAP00000021781 | GATA binding protein 1. | GATA binding protein 2. | 0.647 |
GATA1 | LDB1 | ENSANAP00000028609 | ENSANAP00000034597 | GATA binding protein 1. | LIM domain binding 1. | 0.782 |
GATA1 | LDB2 | ENSANAP00000028609 | ENSANAP00000015577 | GATA binding protein 1. | LIM domain binding 2. | 0.782 |
GATA1 | LMO2 | ENSANAP00000028609 | ENSANAP00000010200 | GATA binding protein 1. | LIM domain only 2. | 0.968 |
GATA1 | TAL1 | ENSANAP00000028609 | ENSANAP00000002438 | GATA binding protein 1. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.907 |
GATA1 | TCF12 | ENSANAP00000028609 | ENSANAP00000034285 | GATA binding protein 1. | Transcription factor 12. | 0.507 |
GATA1 | TCF3 | ENSANAP00000028609 | ENSANAP00000007565 | GATA binding protein 1. | Transcription factor 3. | 0.757 |
GATA2 | GATA1 | ENSANAP00000021781 | ENSANAP00000028609 | GATA binding protein 2. | GATA binding protein 1. | 0.647 |
GATA2 | LDB1 | ENSANAP00000021781 | ENSANAP00000034597 | GATA binding protein 2. | LIM domain binding 1. | 0.800 |
GATA2 | LDB2 | ENSANAP00000021781 | ENSANAP00000015577 | GATA binding protein 2. | LIM domain binding 2. | 0.799 |
GATA2 | LMO2 | ENSANAP00000021781 | ENSANAP00000010200 | GATA binding protein 2. | LIM domain only 2. | 0.806 |
GATA2 | TAL1 | ENSANAP00000021781 | ENSANAP00000002438 | GATA binding protein 2. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.847 |
GATA2 | TCF12 | ENSANAP00000021781 | ENSANAP00000034285 | GATA binding protein 2. | Transcription factor 12. | 0.701 |
GATA2 | TCF3 | ENSANAP00000021781 | ENSANAP00000007565 | GATA binding protein 2. | Transcription factor 3. | 0.624 |
GATA4 | LDB1 | ENSANAP00000010665 | ENSANAP00000034597 | GATA binding protein 4. | LIM domain binding 1. | 0.499 |
GATA4 | LDB2 | ENSANAP00000010665 | ENSANAP00000015577 | GATA binding protein 4. | LIM domain binding 2. | 0.499 |
GATA4 | LMO2 | ENSANAP00000010665 | ENSANAP00000010200 | GATA binding protein 4. | LIM domain only 2. | 0.760 |
GATA4 | TAL1 | ENSANAP00000010665 | ENSANAP00000002438 | GATA binding protein 4. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.670 |
GATA5 | LDB1 | ENSANAP00000028738 | ENSANAP00000034597 | GATA binding protein 5. | LIM domain binding 1. | 0.499 |
GATA5 | LDB2 | ENSANAP00000028738 | ENSANAP00000015577 | GATA binding protein 5. | LIM domain binding 2. | 0.499 |
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